Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015889070.1_cds_XP_016443760.1_38888
CDS Infomation

[gene=LOC107769084] [db_xref=GeneID:107769084] [protein=HIPL1 protein-like] [protein_id=XP_016443760.1] [location=join(18671..18767,18874..19034,19388..20161,20542..20758,20872..21050,21157..21380,21469..21862)] [gbkey=CDS]
Sequence

ATGAATAACCAACTTAATCTGCTGTTCTCATTCATTTGTCTCCTTCTGTATAGCTTCTTC
AATCCATCTTCTTCACTCCCTTTATGCACAGACTTGAGAGCACCTGCTATTCCACAGAAG
CCTTTGGCCTTTTGTCCATATAATGGAAGAGTCTGTTGTGACTCTTCAAAAGATCTGCAA
TTGCAGAAGCTTTTTGAGGGTATGAATATAACTGATGATACAGCATGTAGTTCTGCTGTG
AAGTCAATACTCTGCTCAACATGTGATCAGTTCTCAGCAGAGTTGTTTAAGGTGAAATCA
AGGCCAAGACCAGTCCCTGTTCTTTGCAATTCAACTGCTACATCAGAGAATAGCTTTTGT
TCATCTGTTTGGGATTCTTGCCAAAACATACCAATAACAAATTCTCCTTTTGCACCATCC
TTGAAAACCAAAGCAGGAGAGAGCCAAAACTCAAACTCCTCCTTGTTAACAGACTTCTGG
CAATCGAAAAACGATTTTTGTGAAGCATTTGGTGGAAATTCTGATAAAGATTCATTATGT
TTCAGTGGAGAACAGGTTTTACTCGAGAAAAATGAAACTTTACAGCCTCCCAATGGTATG
TGTTTAGAGAAGATTGCTGATGGAGCTTACCTCAATATGGTTCCTCATCCTGATGGATCG
AACCGCGCATTTTTCTCCAATCAGCCTGGAAAAATTTGGTTAGCAACAATACCAGAACAA
GACTCAGAAGAAGCAATGGAACTTGATGAATCAAGTCCATTTGCTGATTTAACAGATGAT
GTTTATTTAGATGCAAGATTTGGGATGATGGGAATGGCTTTTCATCCAAACTTTGACAAG
AATGGAAGGTTCTTTGCATCATTTAACTGTGACAAAGCTAAGTCTCCTAGATGTGCTGGA
AGATGTGCTTGTAATTCAGATGTTGGTTGTGACCCTTCAAAGATAAACTCAGATGATAAT
AAGCAGCCATGTCAATATCATACTGTTGTTGCAGAGTTCAGTGTTAATGGGATTGCACCA
AATCCATCCAAGGCGGAGAAGGCGAAACCATCAGAAGTGAGAAGAATATTTACAATGGGG
CTCCCATTTACAGCTAATCATGGAGGACAAATACTCATTGGCCCTGAAGATGGATATCTC
TACATTATGATGGGAGATGGTGGTAGCAAGGGTGATTCTTTCAATTTTGCTCAAAATAAG
AAGTCCTTGCTAGGAAAAATTATGAGGGTTGATATCGATAACATACCAAGTCAAGAAGAA
ATATCAGACCTTGGACATTGGGGTAACTATTCAGTTCCTCGAGATAATCCTTATTCACAA
GACAAGGATTTGCAGCCTGAAATTTGGGCTCTAGGATTGAGAGATCCTTGGCGCTGTAGC
TTCGATTCAGAAAGGCCTTCTTACTTCATCTGCGCGGATGTTGGCCAGGATCAATATGAA
GAAGTTGACATCATCACGAGAGGGGGAAACTATGGATGGAGCATGTACGAAGGTCCTTTC
CGCTTTAAAAATGCTTCAGCTGATGATTCTATGGATCCCATCTTCCCAGTATTAGGATAC
AACCATTCTGATATAAATAAAGAGGTTGGATCTGCAGCTATCTCAGGTGGCTATGTTTAT
CGCTCCAAGACTGATCCCTGCATATATGGAAGTTACCTATATGGAGATTTGTATGCTAAG
AATTTCTGGGCAGCTCAAGAAAATCCATACAATAGTGGGAACTTTACAACAAGAGGCATA
CCATTTAGTTGTGCTCATGATTCCCCTCTCAACTGCAGCTCAGTACCCAATAGTCCATTG
CCTGCTTTAGGTTACATATTCTCATTTGGACAGGATAACAGAAAGGATACCTATATTTTA
ACAAGCACCGGCGTATACAGAGTGGTTCGTCCAAGCCGCTGCAACTACACTTGCTCGAAG
GAGATAGTGAGGGCTGCTGAGAGCCCAGGTCCCTCTGCACCTTCAGATGGTCACATTGCT
AAACCAGATTTCTGCTTGGTCCTTGTTCTTTACTGCCTGCTGCATTTGACTAGCTTTATC
TTGTAG

Peptide Sequence

PEP ID

XP_016443760.1
PEP Infomation

PREDICTED: HIPL1 protein-like [Nicotiana tabacum]
Sequence

MNNQLNLLFSFICLLLYSFFNPSSSLPLCTDLRAPAIPQKPLAFCPYNGRVCCDSSKDLQ
LQKLFEGMNITDDTACSSAVKSILCSTCDQFSAELFKVKSRPRPVPVLCNSTATSENSFC
SSVWDSCQNIPITNSPFAPSLKTKAGESQNSNSSLLTDFWQSKNDFCEAFGGNSDKDSLC
FSGEQVLLEKNETLQPPNGMCLEKIADGAYLNMVPHPDGSNRAFFSNQPGKIWLATIPEQ
DSEEAMELDESSPFADLTDDVYLDARFGMMGMAFHPNFDKNGRFFASFNCDKAKSPRCAG
RCACNSDVGCDPSKINSDDNKQPCQYHTVVAEFSVNGIAPNPSKAEKAKPSEVRRIFTMG
LPFTANHGGQILIGPEDGYLYIMMGDGGSKGDSFNFAQNKKSLLGKIMRVDIDNIPSQEE
ISDLGHWGNYSVPRDNPYSQDKDLQPEIWALGLRDPWRCSFDSERPSYFICADVGQDQYE
EVDIITRGGNYGWSMYEGPFRFKNASADDSMDPIFPVLGYNHSDINKEVGSAAISGGYVY
RSKTDPCIYGSYLYGDLYAKNFWAAQENPYNSGNFTTRGIPFSCAHDSPLNCSSVPNSPL
PALGYIFSFGQDNRKDTYILTSTGVYRVVRPSRCNYTCSKEIVRAAESPGPSAPSDGHIA
KPDFCLVLVLYCLLHLTSFIL

Transcript Sequence

Gene sequence data has not been registered.